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Popular Eco-Tours Charters in Puerto Rico  . Good availability and great rates. Read unbiased reviews and choose the best deal for your trip.

Eco-Tours in Puerto Rico- BoatBooker

Puerto Rico

Set your course for Puerto Rico, where vibrant Caribbean waters, steady trade winds, and sun-drenched coastlines create a paradise for Puerto Rico boating charters. From glittering city skylines to wild, unspoiled cays, the island offers an alluring mix of easy coastal cruising, scenic anchorages, and clear-water passages ideal for day trips or multi-day adventures.Skippers and first-time guests alike appreciate calm leeward bays, welcoming marinas, and a variety of routes that reveal coral reefs, seagrass meadows, and mangrove channels teeming with marine life. Swim off powder-soft beaches, drift over snorkeling gardens alive with color, or relax on deck while gentle swells and warm breezes set the rhythm of the day.Nature takes center stage after sunset, when select bays sparkle with bioluminescent glow on the darkest nights—an unforgettable highlight for charter itineraries. By day, island-hop to offshore islets, picnic on secluded sandbars, or explore coastal towns rich in music, cuisine, and history, all framed by emerald hills and impossibly clear seas.Whether you're planning a private yacht outing, a small-group snorkeling cruise, or a family-friendly coastal tour, Puerto Rico delivers versatile cruising grounds and year-round tropical conditions. With short hops between sheltered coves and open-water stretches for confident captains, Puerto Rico boating charters make it easy to blend relaxation and discovery—so you can chart a course that matches your pace and immerse yourself in the island's signature blend of culture, color, and crystal-blue horizons.

Discover the breathtaking beauty of Puerto Rico from a unique perspective with our Puerto Rico Boat Tours. This enchanting Caribbean destination, known for its stunning landscapes, vibrant culture, and rich history, offers an unforgettable boating experience. From the picturesque shores of San Juan, which feature historic sites like Old San Juan Harbor, to the serene bioluminescent bays in La Parguera, every moment is an opportunity to create lifelong memories.

Embark on a Bioluminescent Bay Tour in La Parguera, where you'll witness the magical glow of dinoflagellates lighting up the waters as you swim or paddle through them. Alternatively, explore the stunning beaches and snorkeling spots around Fajardo, including Icacos Cay and Culebra Island, renowned for their crystal-clear waters and vibrant marine life.

Each Puerto Rico Boat Tour offers a chance to immerse yourself in the island's diverse landscapes, from the lush mangroves to the pristine white sands of Flamenco Beach. Whether you're seeking adventure, relaxation, or a mix of both, these tours cater to all interests and preferences. Enjoy sunset cruises, snorkeling excursions, or simply soak up the tropical atmosphere—every experience is designed to captivate your senses and leave you enchanted by Puerto Rico's unique charm.

The morning fishing trip will be conducted using a rod and reel, with live, dead, or artificial bait. The captain will accompany you throughout the fishing process, providing expert guidance. After approximately two hours of fishing, we will embark on a relaxing cruise around our lagoon. The trip commences at 7 a.m.

FishNSea Boston Whaler 22’

San Juan

Experience the beauty of San Juan&#039;s stunning waters aboard FishNSea, a 2001 Boston Whaler 22 Bay boat, perfect for an unforgettable adventure. This sleek vessel comfortably accommodates up to six guests, making it ideal for both intimate getaways and

Experience tranquility on our backwater lagoon tour! Over two hours, glide through calm brackish waters while observing diverse wildlife, including birds, iguanas, caimans, manatees, and stingrays. Our intimate tours are specially designed for up to six passengers, ensuring a personalized adventure with our knowledgeable captain. Enjoy the beauty of the lagoons while also taking advantage of our fishing opportunities. This perfect blend of relaxation and exploration promises unforgettable moments.

Backwater Wildlife & Boat Tours

Discover the magic of San Juan&rsquo;s pristine waters aboard Backwater Fishing &amp; Boat Tours, a sleek 2014 Bay Rider Kencraft Center Console designed for comfort, adventure, and unforgettable memories. Powered by a reliable 150HP Yamaha outboard, this

Have plenty of time visiting the stunning Fajardo Keys—Palomino, Icacos, or Piñero. The Essential Trip includes: - USCG licensed Captain and Mate brings full service - Snorkeling gear and flotation devices - Coolers filled with ice, water, and soda - Snacks and light lunch - Access to the exclusive Safe Harbor Puerto del Rey Marina. 

You can upgrade your experience by adding the following: - BBQ-made fresh food and choosing from the menu for $300 - Personalized Birthday Cake for $75 - Ask for more

All-Inclusive Private Yacht Charter | Fajardo

Ceiba

Picture this: the open Caribbean, turquoise water as far as the eye can see, your favorite music streaming through the speakers, and a freshly made lunch waiting on board. No strangers. No schedules. Just you and your crew. Welcome to Leisure Boat Experie

Departing from Fajardo, explore the islands of Icacos and Palomino for a perfect day on the water.

⚓ 4-Hour Trip (8:30 a.m. – 12:30 p.m)
	•	Visit Icacos & Palomino
	•	Snack platter
	•	Float mat & snorkeling gear
	•	Music
	•	Soft drinks & water
up to 6 guests

Boat trips depart from  Villa Marina, Fajardo, and are operated by licensed Capt. Pablo.

Zaltlifepr

Fajardo

Set sail on Zaltlifepr, a classic 1998 Mako Fishing Center Console that promises an unforgettable day on the crystal-clear waters of Fajardo, Puerto Rico. This versatile 23 vessel comfortably accommodates up to six guests and is powered by a reliable 200 

Enjoy a All inclusive fullday private boat rental departing from Fajardo.

This option is ideal for those who prefer a boat rental up to 6 guests with all included snacks, drinks, beers. The rental includes a licensed captain and private use of the boat. Visiting two Islands perfect for relaxing, cruising, swimming, and enjoying a full day on the water around nearby islands like Icacos and Palominos with al the amenities included, just you and your family or friends.

East Life Adventures PR

Welcome to East Life Adventures PR we are a company focused on delivering safe, fun, and personalized experiences on the crystal clear waters of the East of PR like Icacos and Palomino,we specialize in private boat tours departing from Fajardo, Puerto Ric

Enjoy a completely private and exclusive boating adventure at destinations such as Icacos, Lobos, Palomino, and Palominito. For an additional cost, we also offer trips to Culebra, Culebrita, Luis Peña, and Vieques that will require prior approval. Whether you're looking to relax or explore, this VIP experience includes guided snorkeling tours, marine life spotting, and even a floating carpet for lounging. SNACK, BEER, RUM INCLUDED.

Boriken Voyager Charter

Step aboard Boriken Voyager, a sleek 26&rsquo;3&rdquo; Grady-White Chase Center Console powered by twin 200 HP Yamaha engines, combining performance, comfort, and style for up to nine guests. Departing from the vibrant marina of Fajardo, this private char

River & Beach Party Boat!
Experience Puerto Rico's only navigable river and the exclusive Four Seasons beach. Our 5-hour tour (2-hour scenic cruise + 3 hours at the beach) includes water, snacks, towels, and games. BYOB!
Family-owned since 1970, with fabulous reviews, we offer the best of the Espíritu Santo River and the Atlantic. Book the ultimate 5-star escape!

Paseadora Río Espíritu Santo PARTY BOAT BEACH

Río Grande

La Paseadora R&iacute;o Esp&iacute;ritu Santo is a restored 2008 Sun Tracker 25&rsquo; Pontoon (refurbished in 2018), based in R&iacute;o Grande. Powered by a 75 HP Yamaha outboard engine, it offers a smooth and relaxed cruise at up to 10 knots, ideal for

Experience San Juan Bay under the bright Caribbean sun on this relaxing afternoon sightseeing cruise. As you travel along the historic shoreline of Old San Juan, you'll enjoy incredible views of El Morro, La Fortaleza, the city walls, and the cruise port from the water. A knowledgeable guide will point out important landmarks and share stories about the island's past, creating a fun and informative experience for everyone on board.

Castaway Charters Puerto Rico

Experience the ultimate boating adventure with Castaway Charters Puerto Rico aboard a fully restored 2008 SeaFox Pro Series 24 Walkaround (2023 restoration), based in beautiful San Juan. Perfect for up to six guests, this sleek and powerful vessel is driv

In the Charter of the Caribbean, you have the privacy to go on a new and private boat with a certified captain and a host who will let you explore any of our chosen destinations, making your experience enjoyable and unique. 

The Charter Concept

Choose your destination with a group of up to 6 people.
We have the option of booking a half or full day with us.
Our destination options are some of the most beautiful places Puerto Rico has to offer.

Charter of the Caribbean – Icacos or Palomino

Set out on an unforgettable Caribbean escape aboard the sleek 2022 Sea Fox 268 Commander, departing from Fajardo to the crystal-clear waters of Icacos or Palomino. Perfect for small groups of up to six guests, this powerful center console, equipped with t

Escape to the crystal-clear waters of Isla de Ratones on this relaxing private island tour in Cabo Rojo. Spend the day swimming, snorkeling vibrant reefs, or simply unwinding on the sand while taking in the beautiful Caribbean scenery. We'll take care of the rest with a freshly prepared lunch on the grill plus complimentary soft drinks to keep you refreshed. A great trip for families with curious children.

Hola Fishing Charters

Cabo Rojo

Set out from Cabo Rojo aboard Hola Fishing Charters, a beautifully restored 2008 Seaborne PR 280 Tournament Center Console, refreshed in 2025 and ready for an unforgettable day on the water. With room for up to six guests and twin 200 HP Suzuki outboards 

Eco-Tours in Puerto Rico

Top Eco-Tours in Puerto Rico